AFF4 AF4/FMR2 family member 4
Gene info
Synonyms
AF5Q31, MCEF
Previous symbol
None
External ID
HGNC: 17869
Entrez Gene: 27125
Ensembl: ENSG00000072364
UCSC: uc003kyd.4
OMIM:
604417
UniProtKB:
Q9UHB7
Disease info
Disease
- CHOPS syndrome (AD)
CHD Phenotype
- Ventricular septal defect
- Patent ductus arteriosus
- Patent foramen ovale
Extra Cardiac Phenotype
Facial dysmorphism, Microcephaly, Developmental delay, Hearing loss, Failure to thrive, Laryngomalacia, Gastrointestinal dysfunction, genito-urinary deformities, Kyphoscoliosis, Brachydactyly
Incomplete penetrance
Unknown
Variable expressivity
Unknown
Animal model
Mouse study
MGI: No cardiovascular defect recorded
MGI ID
Variant info
Clinvar
Selected variant
The Clinvar variants presented in the below IGV track were selected based on the following criteria.
- Variant types are single nucleotide variant or Indel
- Clinical significance for the variant was assessed to be Pathogenic or Likely Pathogenic
- ClinVar review status for the variant is criteria provided
Download annotation file for AFF4: BED file
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Selected References
- Izumi, K., Nakato, R., Zhang, Z., Edmondson, A. C., Noon, S., Dulik, M. C., Rajagopalan, R., Venditti, C. P., Gripp, K., Samanich, J., Zackai, E. H., Deardorff, M. A., Clark, D., Allen, J. L., Dorsett, D., Misulovin, Z., Komata, M., Bando, M., Kaur, M., … Krantz, I. D. (2015). Germline gain-of-function mutations in AFF4 cause a developmental syndrome functionally linking the super elongation complex and cohesin. Nature Genetics, 47(4), 338–344. https://doi.org/10.1038/ng.3229 DOI:10.1038/ng.3229 PMID:25730767
- Raible, S. E., Mehta, D., Bettale, C., Fiordaliso, S., Kaur, M., Medne, L., Rio, M., Haan, E., White, S. M., Cusmano‐Ozog, K., Nishi, E., Guo, Y., Wu, H., Shi, X., Zhao, Q., Zhang, X., Lei, Q., Lu, A., He, X., … Izumi, K. (2019). Clinical and molecular spectrum of CHOPS syndrome. American Journal of Medical Genetics Part A. Portico. https://doi.org/10.1002/ajmg.a.61174 DOI:10.1002/ajmg.a.61174 PMID:31058441